Model creationΒΆ
All extended model creations start with XbaModel.
- XbaModel
XbaModelXbaModel.sbml_containerXbaModel.model_attrsXbaModel.unit_defsXbaModel.compartmentsXbaModel.parametersXbaModel.speciesXbaModel.reactionsXbaModel.objectivesXbaModel.gpsXbaModel.groupsXbaModel.func_defsXbaModel.init_assignsXbaModel.uid2gpXbaModel.locus2gpXbaModel.locus2uidXbaModel.locus2ridsXbaModel.enzymesXbaModel.proteinsXbaModel.ncbi_dataXbaModel.uniprot_dataXbaModel.configure()XbaModel.print_size()XbaModel.validate()XbaModel.export()XbaModel.export_kcats()XbaModel.export_enz_composition()XbaModel.generate_turnup_input()
- EcModel
- RbaModel
RbaModelRbaModel.modelRbaModel.dnaRbaModel.rnasRbaModel.proteinsRbaModel.metabolismRbaModel.parametersRbaModel.processesRbaModel.densitiesRbaModel.targetsRbaModel.enzymesRbaModel.mediumRbaModel.cid_mappingsRbaModel.mmid2mmRbaModel.initial_assignmentsRbaModel.parameter_valuesRbaModel.configure()RbaModel.validate()RbaModel.export()
- TfaModel